ISDA: 8JM8

Deposition Date 2023-06-04

Release Date 2024-06-05

Last Version Date 2024-11-13

Entry Detail

PDB ID:

8JM8

Keywords:

LYASE

Title:

Endo-deglycosylated hydroxynitrile lyase isozyme 5 mutant L331A from Prunus communis complexed with (R)-2-(2,2-dimethyl-4H-benzo[d][1,3]dioxin-6-yl)-2-hydroxyacetonitrile

Biological Source:

Source Organism:

Prunus dulcis (Taxon ID: 3755)

Host Organism:

Komagataella pastoris

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.70 Å

R-Value Free:

0.21

R-Value Work:

0.17

R-Value Observed:

0.17

Space Group:

P 21 21 21

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:(R)-mandelonitrile lyase
Mutagens:L331A
Chain IDs:A
Chain Length:540
Number of Molecules:1
Biological Source:Prunus dulcis

UniProt ID:Q7XJE8 Pfam ID:PF00732, PF05199

Ligand Molecules

E2Y

EDO

FAD

NAG

PEG

Primary Citation

Endo-deglycosylated hydroxynitrile lyase isozyme 5 mutant L331A from Prunus communis complexed with (R)-2-(2,2-dimethyl-4H-benzo[d][1,3]dioxin-6-yl)-2-hydroxyacetonitrile

Zheng, Y.-C, Li, F.-L, Yu, H.-L, Xu, J.-H.Show

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Primary Citation of related structures

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