ISDA: 8JM6

Deposition Date 2023-06-04

Release Date 2024-06-05

Last Version Date 2024-10-09

Entry Detail

PDB ID:

8JM6

Keywords:

LYASE

Title:

Endo-deglycosylated hydroxynitrile lyase isozyme 5 mutant L331A/S333V/P340L from Prunus communis complexed with 2,2-dimethyl-4H-benzo[d][1,3]dioxine-6-carbaldehyde (catalytic conformation)

Biological Source:

Source Organism:

Prunus dulcis (Taxon ID: 3755)

Host Organism:

Komagataella pastoris

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.91 Å

R-Value Free:

0.18

R-Value Work:

0.14

R-Value Observed:

0.14

Space Group:

P 21 21 21

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:(R)-mandelonitrile lyase
Mutagens:L331A,S333V,P340L
Chain IDs:A
Chain Length:540
Number of Molecules:1
Biological Source:Prunus dulcis

UniProt ID:Q7XJE8 Pfam ID:PF00732, PF05199

Ligand Molecules

FAD

FQ3

NAG

PO4

Primary Citation

Endo-deglycosylated hydroxynitrile lyase isozyme 5 mutant L331A/S333V/P340L from Prunus communis complexed with 2,2-dimethyl-4H-benzo[d][1,3]dioxine-6-carbaldehyde (catalytic conformation)

Zheng, Y.-C, Li, F.-L, Yu, H.-L, Xu, J.-H.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

Feedback Form