ISDA

Deposition Date 2023-05-17

Release Date 2024-05-22

Last Version Date 2024-05-22

Entry Detail

PDB ID:

8JF5

Keywords:

FLAVOPROTEIN

Title:

Crystal structure of Lysine Specific Demethylase 1 (LSD1) with TAS1440

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

3.20 Å

R-Value Free:

0.23

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

I 2 2 2

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Lysine-specific histone demethylase 1A
Gene (Uniprot):KDM1A
Chain IDs:A
Chain Length:663
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:O60341 Pfam ID:PF04433, PF01593 EC:1.14.11.65

Protein Blast

Polymer Type:polypeptide(L)
Molecule:REST corepressor 1
Gene (Uniprot):RCOR1
Chain IDs:B
Chain Length:135
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q9UKL0 Pfam ID:PF20878, PF00249

Ligand Molecules

FAD

GOL

UEU

Primary Citation

TAS1440, a histone H3 competitive LSD1 inhibitor, activates both TGF-beta and notch signaling pathways via INSM1 dissociation in neuroendocrine small cell lung cancer

Machida, T, Tsukioka, S, Gong, Y, Onodera, A, Nakayama, A, Hashimoto, N, Ohkubo, S, Tanaka, T.Show

To Be Published ? ? ? (?)

Primary Citation of related structures