ISDA: 8JF5

Deposition Date 2023-05-17

Release Date 2024-05-22

Last Version Date 2024-05-22

Entry Detail

PDB ID:

8JF5

Keywords:

FLAVOPROTEIN

Title:

Crystal structure of Lysine Specific Demethylase 1 (LSD1) with TAS1440

Biological Source:

Source Organism(s):

Homo sapiens (Taxon ID: 9606)

Expression System(s):

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

3.20 Å

R-Value Free:

0.23

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

I 2 2 2

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Lysine-specific histone demethylase 1A
Gene (Uniprot):KDM1A
Chain IDs:A
Chain Length:663
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:O60341 Pfam ID:PF04433, PF01593 EC:1.14.11.65

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:REST corepressor 1
Gene (Uniprot):RCOR1
Chain IDs:B
Chain Length:135
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q9UKL0 Pfam ID:PF20878, PF00249

Ligand Molecules

FAD

GOL

UEU

Primary Citation

TAS1440, a histone H3 competitive LSD1 inhibitor, activates both TGF-beta and notch signaling pathways via INSM1 dissociation in neuroendocrine small cell lung cancer

Machida, T, Tsukioka, S, Gong, Y, Onodera, A, Nakayama, A, Hashimoto, N, Ohkubo, S, Tanaka, T.Show

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Primary Citation of related structures

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