8JCQ image
Deposition Date 2023-05-11
Release Date 2024-05-22
Last Version Date 2025-04-23
Entry Detail
PDB ID:
8JCQ
Keywords:
Title:
Crystal structure of calotropain FI from Calotropis gigantea
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.25 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Procerain
Chain IDs:A
Chain Length:214
Number of Molecules:1
Biological Source:Calotropis gigantea
Ligand Molecules
Primary Citation
Crystal Structure of Papain-Like Cysteine Protease, Calotropain FI, Purified from the Latex of Calotropis gigantea.
J.Agric.Food Chem. 73 9398 9407 (2025)
PMID: 40036158 DOI: 10.1021/acs.jafc.4c10898

Abstact

The latex of Calotropis gigantea and Calotropis procera elute as two distinct peaks on cation exchange chromatography. One of the peaks is reported to possess multiple papain-like cysteine proteases with different biochemical properties that have been identified with different names. This is mainly due to the absence of a primary sequence for the proteases. Here, we report the crystal structures of calotropain FI from C. gigantea bound to the inhibitor E64 at pH 6 and 9 at 1.25 and 1.4 Å, respectively. Both structures are identical and are very similar to ervatamin B and papain structures. The high quality of electron density maps revealed the primary sequence of calotropain FI. The sequence comparison shows that calotropain FI from C. gigantea is orthologous to procerain, CpCp1-3, and SnuCalCp03 from C. procera and rather distinct from procerain B.

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Primary Citation of related structures