8JBN image
Deposition Date 2023-05-09
Release Date 2024-02-28
Last Version Date 2024-02-28
Entry Detail
PDB ID:
8JBN
Keywords:
Title:
Vascular endothelial protein tyrosine phosphatase in complex with Cpd-1
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.99 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.17
Space Group:
P 61 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Receptor-type tyrosine-protein phosphatase beta
Gene (Uniprot):PTPRB
Chain IDs:A, B
Chain Length:295
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Fragment-Based Discovery of Novel VE-PTP Inhibitors Using Orthogonal Biophysical Techniques.
Biochemistry 62 2161 2169 (2023)
PMID: 37414577 DOI: 10.1021/acs.biochem.3c00079

Abstact

Tyrosine phosphorylation is an essential post-translational modification that regulates various biological events and is implicated in many diseases including cancer and atherosclerosis. Vascular endothelial protein tyrosine phosphatase (VE-PTP), which plays an important role in vascular homeostasis and angiogenesis, is therefore an attractive drug target for these diseases. However, there are still no drugs targeting PTP including VE-PTP. In this paper, we report the discovery of a novel VE-PTP inhibitor, Cpd-2, by fragment-based screening combining various biophysical techniques. Cpd-2 is the first VE-PTP inhibitor with a weakly acidic structure and high selectivity, unlike known strongly acidic inhibitors. We believe that this compound represents a new possibility for the development of bioavailable VE-PTP inhibitors.

Legend

Protein

Chemical

Disease

Primary Citation of related structures