8JAP image
Deposition Date 2023-05-06
Release Date 2024-12-18
Last Version Date 2024-12-18
Entry Detail
PDB ID:
8JAP
Keywords:
VIRAL PROTEIN
Title:
Cryo-EM structure of SARS-CoV-2 WT RBD in complex with W328-6H2 (local refinement)
Biological Source:
Source Organism:
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.81 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8JAP validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein
Gene (Uniprot):S
Chain IDs:A
Chain Length:540
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTC2 Pfam ID:PF16451, PF09408
Polymer Type:polypeptide(L)
Molecule:H chain of W328-6H2 Fab region
Chain IDs:B (auth: H)
Chain Length:107
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:L chain of W328-6H2 Fab region
Chain IDs:C (auth: L)
Chain Length:112
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
NAG
Primary Citation
Cryo-EM structure of SARS-CoV-2 WT RBD in complex with W328-6H2 (local refinement)
To Be Published ? ? ? (?)
Primary Citation of related structures
8JAP