8J9B image
Deposition Date 2023-05-03
Release Date 2024-05-08
Last Version Date 2025-04-09
Entry Detail
PDB ID:
8J9B
Keywords:
Title:
LnaB-actin binary complex
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.42 Å
R-Value Free:
0.29
R-Value Work:
0.28
Space Group:
P 31
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Actin gamma 1
Gene (Uniprot):ACTG1
Chain IDs:A, B, C, D, E, F
Chain Length:375
Number of Molecules:6
Biological Source:Oryctolagus cuniculus
Polymer Type:polypeptide(L)
Molecule:Type IV secretion protein Dot
Chain IDs:G (auth: H), H (auth: I), I (auth: J), J (auth: K)
Chain Length:441
Number of Molecules:4
Biological Source:Legionella pneumophila
Primary Citation
Legionella maintains host cell ubiquitin homeostasis by effectors with unique catalytic mechanisms.
Nat Commun 15 5953 5953 (2024)
PMID: 39009586 DOI: 10.1038/s41467-024-50311-2

Abstact

The intracellular bacterial pathogen Legionella pneumophila modulates host cell functions by secreting multiple effectors with diverse biochemical activities. In particular, effectors of the SidE family interfere with host protein ubiquitination in a process that involves production of phosphoribosyl ubiquitin (PR-Ub). Here, we show that effector LnaB converts PR-Ub into ADP-ribosylated ubiquitin, which is further processed to ADP-ribose and functional ubiquitin by the (ADP-ribosyl)hydrolase MavL, thus maintaining ubiquitin homeostasis in infected cells. Upon being activated by actin, LnaB also undergoes self-AMPylation on tyrosine residues. The activity of LnaB requires a motif consisting of Ser, His and Glu (SHxxxE) present in a large family of toxins from diverse bacterial pathogens. Thus, our study sheds light on the mechanisms by which a pathogen maintains ubiquitin homeostasis and identifies a family of enzymes capable of protein AMPylation.

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Primary Citation of related structures