8J83 image
Deposition Date 2023-04-29
Release Date 2023-10-11
Last Version Date 2023-10-11
Entry Detail
PDB ID:
8J83
Keywords:
OXIDOREDUCTASE
Title:
Crystal structure of formate dehydrogenase from Methylorubrum extorquens AM1
Biological Source:
Source Organism:
Methylorubrum extorquens AM1 (Taxon ID: 272630)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.40 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.22
Space Group:
C 1 2 1
8J83 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tungsten-containing formate dehydrogenase alpha subunit
Gene (Uniprot):fdh1A
Chain IDs:A
Chain Length:989
Number of Molecules:1
Biological Source:Methylorubrum extorquens AM1
UniProt ID:C5ATT7 Pfam ID:PF13510, PF12838, PF04879, PF00384, PF01568
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tungsten-containing formate dehydrogenase beta subunit
Gene (Uniprot):fdh1B
Chain IDs:B
Chain Length:572
Number of Molecules:1
Biological Source:Methylorubrum extorquens AM1
UniProt ID:C5ATT6 Pfam ID:PF01512, PF01257, PF10531, PF10589
Ligand Molecules
FES
FMN
GOL
MGD
PEG
SF4
W
Primary Citation
Structure and function relationship of formate dehydrogenases: an overview of recent progress.
Iucrj 10 544 554 (2023)
PMID: 37668215 DOI: 10.1107/S2052252523006437

Abstact

Formate dehydrogenases (FDHs) catalyze the two-electron oxidation of formate to carbon dioxide. FDHs can be divided into several groups depending on their subunit composition and active-site metal ions. Metal-dependent (Mo- or W-containing) FDHs from prokaryotic organisms belong to the superfamily of molybdenum enzymes and are members of the dimethylsulfoxide reductase family. In this short review, recent progress in the structural analysis of FDHs together with their potential biotechnological applications are summarized.

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Primary Citation of related structures
8J83