8J7A image
Entry Detail
PDB ID:
8J7A
EMDB ID:
Keywords:
Title:
Coordinates of Cryo-EM structure of the Arabidopsis thaliana PSI in state 1 (PSI-ST1)
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-04-27
Release Date:
2023-11-15
Method Details:
Experimental Method:
Resolution:
3.06 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Chlorophyll a-b binding protein 6, chloroplastic
Chain IDs:A (auth: 1)
Chain Length:241
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Photosystem I chlorophyll a/b-binding protein 2, chloroplastic
Chain IDs:B (auth: 2)
Chain Length:257
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic
Chain IDs:C (auth: 3)
Chain Length:273
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Chlorophyll a-b binding protein 4, chloroplastic
Chain IDs:D (auth: 4)
Chain Length:251
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Photosystem I P700 chlorophyll a apoprotein A1
Chain IDs:E (auth: A)
Chain Length:750
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Photosystem I P700 chlorophyll a apoprotein A2
Chain IDs:F (auth: B)
Chain Length:734
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Photosystem I iron-sulfur center
Chain IDs:G (auth: C)
Chain Length:81
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Photosystem I reaction center subunit II-2, chloroplastic
Chain IDs:H (auth: D)
Chain Length:204
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Photosystem I reaction center subunit IV A, chloroplastic
Chain IDs:I (auth: E)
Chain Length:143
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Photosystem I reaction center subunit III, chloroplastic
Chain IDs:J (auth: F)
Chain Length:221
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Photosystem I reaction center subunit V, chloroplastic
Chain IDs:K (auth: G)
Chain Length:160
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Photosystem I reaction center subunit VI-2, chloroplastic
Chain IDs:L (auth: H)
Chain Length:145
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Photosystem I reaction center subunit VIII
Chain IDs:M (auth: I)
Chain Length:37
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Photosystem I reaction center subunit IX
Chain IDs:N (auth: J)
Chain Length:44
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Photosystem I reaction center subunit psaK, chloroplastic
Chain IDs:O (auth: K)
Chain Length:130
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Photosystem I reaction center subunit XI, chloroplastic
Chain IDs:P (auth: L)
Chain Length:219
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Primary Citation
Regulatory dynamics of the higher-plant PSI-LHCI supercomplex during state transitions.
Mol Plant 16 1937 1950 (2023)
PMID: 37936349 DOI: 10.1016/j.molp.2023.11.002

Abstact

State transition is a fundamental light acclimation mechanism of photosynthetic organisms in response to the environmental light conditions. This process rebalances the excitation energy between photosystem I (PSI) and photosystem II through regulated reversible binding of the light-harvesting complex II (LHCII) to PSI. However, the structural reorganization of PSI-LHCI, the dynamic binding of LHCII, and the regulatory mechanisms underlying state transitions are less understood in higher plants. In this study, using cryoelectron microscopy we resolved the structures of PSI-LHCI in both state 1 (PSI-LHCI-ST1) and state 2 (PSI-LHCI-LHCII-ST2) from Arabidopsis thaliana. Combined genetic and functional analyses revealed novel contacts between Lhcb1 and PsaK that further enhanced the binding of the LHCII trimer to the PSI core with the known interactions between phosphorylated Lhcb2 and the PsaL/PsaH/PsaO subunits. Specifically, PsaO was absent in the PSI-LHCI-ST1 supercomplex but present in the PSI-LHCI-LHCII-ST2 supercomplex, in which the PsaL/PsaK/PsaA subunits undergo several conformational changes to strengthen the binding of PsaO in ST2. Furthermore, the PSI-LHCI module adopts a more compact configuration with shorter Mg-to-Mg distances between the chlorophylls, which may enhance the energy transfer efficiency from the peripheral antenna to the PSI core in ST2. Collectively, our work provides novel structural and functional insights into the mechanisms of light acclimation during state transitions in higher plants.

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