8J6K image
Entry Detail
PDB ID:
8J6K
Title:
Crystal structure of pro-interleukin-18 and caspase-4 complex
Biological Source:
PDB Version:
Deposition Date:
2023-04-26
Release Date:
2023-11-29
Method Details:
Experimental Method:
Resolution:
3.12 Å
R-Value Free:
0.26
R-Value Work:
0.23
R-Value Observed:
0.24
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Caspase-4 subunit p20
Mutations:C258A
Chain IDs:A
Chain Length:169
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Interleukin-18
Chain IDs:C (auth: B)
Chain Length:194
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Arginine ADP-riboxanase OspC3
Chain IDs:D (auth: C)
Chain Length:161
Number of Molecules:1
Biological Source:Shigella flexneri
Polymer Type:polypeptide(L)
Description:Caspase-4 subunit p10
Chain IDs:B (auth: a)
Chain Length:169
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Recognition and maturation of IL-18 by caspase-4 noncanonical inflammasome.
Nature 624 442 450 (2023)
PMID: 37993714 DOI: 10.1038/s41586-023-06742-w

Abstact

The canonical (caspase-1) and noncanonical (comprising caspases 4, 5 and 11; hereafter, caspase-4/5/11) inflammasomes both cleave gasdermin D (GSDMD) to induce pyroptosis1,2. Whereas caspase-1 processes IL-1β and IL-18 for maturation3-6, no cytokine target has been firmly established for lipopolysaccharide-activated caspase-4/5/117-9. Here we show that activated human caspase-4, but not mouse caspase-11, directly and efficiently processes IL-18 in vitro and during bacterial infections. Caspase-4 cleaves the same tetrapeptide site in pro-IL-18 as caspase-1. The crystal structure of the caspase-4-pro-IL-18 complex reveals a two-site (binary) substrate-recognition mechanism; the catalytic pocket engages the tetrapeptide, and a unique exosite that critically recognizes GSDMD10 similarly binds to a specific structure formed jointly by the propeptide and post-cleavage-site sequences in pro-IL-18. This binary recognition is also used by caspase-5 as well as caspase-1 to process pro-IL-18. In caspase-11, a structural deviation around the exosite underlies its inability to target pro-IL-18, which is restored by rationally designed mutations. The structure of pro-IL-18 features autoinhibitory interactions between the propeptide and the post-cleavage-site region, preventing recognition by the IL-18Rα receptor. Cleavage by caspase-1, -4 or -5 induces substantial conformational changes of IL-18 to generate two critical receptor-binding sites. Our study establishes IL-18 as a target of lipopolysaccharide-activated caspase-4/5. The finding is paradigm shifting in the understanding of noncanonical-inflammasome-mediated defences and also the function of IL-18 in immunity and disease.

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