8IXI image
Entry Detail
PDB ID:
8IXI
Keywords:
Title:
Crystal structure of macrolide phosphotransferase from Klebsiella pneumoniae
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-04-01
Release Date:
2024-01-31
Method Details:
Experimental Method:
Resolution:
2.28 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Macrolide 2'-phosphotransferase
Chain IDs:A, B
Chain Length:297
Number of Molecules:2
Biological Source:Klebsiella pneumoniae
Primary Citation
Systems engineering of Escherichia coli for high-level glutarate production from glucose.
Nat Commun 15 1032 1032 (2024)
PMID: 38310110 DOI: 10.1038/s41467-024-45448-z

Abstact

Glutarate is a key monomer in polyester and polyamide production. The low efficiency of the current biosynthetic pathways hampers its production by microbial cell factories. Herein, through metabolic simulation, a lysine-overproducing E. coli strain Lys5 is engineered, achieving titer, yield, and productivity of 195.9 g/L, 0.67 g/g glucose, and 5.4 g/L·h, respectively. Subsequently, the pathway involving aromatic aldehyde synthase, monoamine oxidase, and aldehyde dehydrogenase (AMA pathway) is introduced into E. coli Lys5 to produce glutarate from glucose. To enhance the pathway's efficiency, rational mutagenesis on the aldehyde dehydrogenase is performed, resulting in the development of variant Mu5 with a 50-fold increase in catalytic efficiency. Finally, a glutarate tolerance gene cbpA is identified and genomically overexpressed to enhance glutarate productivity. With enzyme expression optimization, the glutarate titer, yield, and productivity of E. coli AMA06 reach 88.4 g/L, 0.42 g/g glucose, and 1.8 g/L·h, respectively. These findings hold implications for improving glutarate biosynthesis efficiency in microbial cell factories.

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