8ILZ image
Deposition Date 2023-03-05
Release Date 2023-04-26
Last Version Date 2024-05-29
Entry Detail
PDB ID:
8ILZ
Title:
Crystal structure of the RRM domain of human SETD1B
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.77 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 65
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone-lysine N-methyltransferase SETD1B
Gene (Uniprot):SETD1B
Chain IDs:A
Chain Length:103
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Molecular insight into the SETD1A/B N-terminal region and its interaction with WDR82.
Biochem.Biophys.Res.Commun. 658 136 140 (2023)
PMID: 37030068 DOI: 10.1016/j.bbrc.2023.03.064

Abstact

SETD1A and SETD1B originate from Set1, the sole H3K4 methyltransferase in yeast, and they play important roles in active gene transcription. Here, we present the crystal structures of the RRM domains of human SETD1A and SETD1B. Although both RRM domains adopt a canonical RRM fold, their structural features are different from that of the yeast Set1 RRM domain, their yeast homolog. By using an ITC binding assay, we found an intrinsically disordered region in SETD1A/B binds WDR82. The structural analysis implies that the positively charged regions within human RRM domains might be involved in binding to RNA. Our work provides structural insight into the assembly of WDR82 with the catalytic subunits SETD1A/B in the context of the whole complex.

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Primary Citation of related structures