8IKW image
Deposition Date 2023-03-01
Release Date 2024-02-07
Last Version Date 2024-10-16
Entry Detail
PDB ID:
8IKW
Keywords:
Title:
A complex structure of PGIP-PG
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.94 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Polygalacturonase inhibitor 2
Gene (Uniprot):PGIP2
Mutagens:N303D
Chain IDs:A, C, D (auth: E), E (auth: G)
Chain Length:313
Number of Molecules:4
Biological Source:Phaseolus vulgaris
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Endo-polygalacturonase
Gene (Uniprot):FPHYL_6983
Chain IDs:B, F (auth: D), G (auth: F), H
Chain Length:349
Number of Molecules:4
Biological Source:Fusarium phyllophilum
Primary Citation
A plant mechanism of hijacking pathogen virulence factors to trigger innate immunity.
Science 383 732 739 (2024)
PMID: 38359129 DOI: 10.1126/science.adj9529

Abstact

Polygalacturonase-inhibiting proteins (PGIPs) interact with pathogen-derived polygalacturonases to inhibit their virulence-associated plant cell wall-degrading activity but stimulate immunity-inducing oligogalacturonide production. Here we show that interaction between Phaseolus vulgaris PGIP2 (PvPGIP2) and Fusarium phyllophilum polygalacturonase (FpPG) enhances substrate binding, resulting in inhibition of the enzyme activity of FpPG. This interaction promotes FpPG-catalyzed production of long-chain immunoactive oligogalacturonides, while diminishing immunosuppressive short oligogalacturonides. PvPGIP2 binding creates a substrate binding site on PvPGIP2-FpPG, forming a new polygalacturonase with boosted substrate binding activity and altered substrate preference. Structure-based engineering converts a putative PGIP that initially lacks FpPG-binding activity into an effective FpPG-interacting protein. These findings unveil a mechanism for plants to transform pathogen virulence activity into a defense trigger and provide proof of principle for engineering PGIPs with broader specificity.

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Primary Citation of related structures