8IK5 image
Deposition Date 2023-02-28
Release Date 2024-03-06
Last Version Date 2024-03-06
Entry Detail
PDB ID:
8IK5
Keywords:
DNA BINDING PROTEIN/DNA
Title:
Transcription factor LMX1a homeobox domain in complex with Wnt1 promoter
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.99 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
8IK5 validation report
Macromolecular Entities
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*CP*CP*AP*TP*AP*TP*TP*TP*AP*AP*TP*CP*TP*TP*C)-3')
Chain IDs:A
Chain Length:15
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*GP*GP*AP*AP*GP*AP*TP*TP*AP*AP*AP*TP*AP*TP*G)-3')
Chain IDs:B
Chain Length:15
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:LMX1A factor
Chain IDs:C
Chain Length:67
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q8TE12 Pfam ID:PF00046
Ligand Molecules
GOL
Primary Citation
Structural insights into the recognition of the A/T-rich motif in target gene promoters by the LMX1a homeobox domain
Febs J. ? ? ? (2024)
Primary Citation of related structures
8IK5