8IEV image
Entry Detail
PDB ID:
8IEV
Title:
Crystal structure of the DUF2891 family protein CJ0554 from Campylobacter jejuni in space group C2
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2023-02-16
Release Date:
2023-05-31
Method Details:
Experimental Method:
Resolution:
2.08 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:DUF2891 domain-containing protein
Mutations:N200S
Chain IDs:A, B, C, D, E, F
Chain Length:340
Number of Molecules:6
Biological Source:Campylobacter jejuni
Primary Citation
Unique dimeric structure of the DUF2891 family protein CJ0554 from Campylobacter jejuni.
Biochem.Biophys.Res.Commun. 655 11 17 (2023)
PMID: 36913761 DOI: 10.1016/j.bbrc.2023.03.010

Abstact

Campylobacter jejuni is a pathogenic bacterium that causes enteritis and Guillain-Barre syndrome in humans. To identify a protein target for the development of a new therapeutic against C. jejuni infection, each gene product of C. jejuni must be functionally characterized. The cj0554 gene of C. jejuni encodes a DUF2891 family protein with unknown functions. To provide functional insights into CJ0554, we determined and analyzed the crystal structure of the CJ0554 protein. CJ0554 adopts an (α/α)6-barrel structure, which consists of an inner α6 ring and an outer α6 ring. CJ0554 assembles into a dimer in a unique top-to-top orientation that is not observed in its structural homologs, N-acetylglucosamine 2-epimerase superfamily members. Dimer formation was verified by analyzing CJ0554 and its ortholog protein through gel-filtration chromatography. The top of the CJ0554 monomer barrel harbors a cavity, which is connected to that of the second subunit in the dimer structure, generating a larger intersubunit cavity. This elongated cavity accommodates extra nonproteinaceous electron density, presumably as a pseudosubstrate, and is lined with generally catalytically active histidine residues that are invariant in CJ0554 orthologs. Therefore, we propose that the cavity functions as the active site of CJ0554.

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