8IDI image
Deposition Date 2023-02-13
Release Date 2024-02-28
Last Version Date 2024-10-23
Entry Detail
PDB ID:
8IDI
Keywords:
VIRAL PROTEIN
Title:
Crystal structure of nanobody VHH-T71 with MERS-CoV RBD
Biological Source:
Source Organism:
Camelus dromedarius (Taxon ID: 9838)
Middle East respiratory syndrome-related coronavirus (Taxon ID: 1335626)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.90 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
C 1 2 1
8IDI validation report
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:VHH-T71
Chain IDs:A, C
Chain Length:137
Number of Molecules:2
Biological Source:Camelus dromedarius
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike protein S1
Chain IDs:B, D
Chain Length:229
Number of Molecules:2
Biological Source:Middle East respiratory syndrome-related coronavirus
UniProt ID:K9N5Q8 Pfam ID:PF09408
Primary Citation
Structural Definition of a Novel Nanobody Binding Site specifically targeting the MERS-CoV RBD Core-Domain with Neutralizing Capacity
To Be Published ? ? ? (?)
Primary Citation of related structures
8IDI