8ID8 image
Entry Detail
PDB ID:
8ID8
EMDB ID:
Title:
Cryo-EM structure of the TUG891 bound GPR120-Gi complex
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-02-12
Release Date:
2023-03-15
Method Details:
Experimental Method:
Resolution:
3.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(i) subunit alpha-1
Chain IDs:A
Chain Length:354
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Chain IDs:B
Chain Length:339
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Free fatty acid receptor 4
Chain IDs:C (auth: R)
Chain Length:361
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:scFv16
Chain IDs:D (auth: S)
Chain Length:285
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
Chain IDs:E (auth: Y)
Chain Length:71
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Unsaturated bond recognition leads to biased signal in a fatty acid receptor.
Science 380 eadd6220 eadd6220 (2023)
PMID: 36862765 DOI: 10.1126/science.add6220

Abstact

Individual free fatty acids (FAs) play important roles in metabolic homeostasis, many through engagement with more than 40G protein-coupled receptors. Searching for receptors to sense beneficial omega-3 FAs of fish oil enabled the identification of GPR120, which is involved in a spectrum of metabolic diseases. Here, we report six cryo-electron microscopy structures of GPR120 in complex with FA hormones or TUG891 and Gi or Giq trimers. Aromatic residues inside the GPR120 ligand pocket were responsible for recognizing different double-bond positions of these FAs and connect ligand recognition to distinct effector coupling. We also investigated synthetic ligand selectivity and the structural basis of missense single-nucleotide polymorphisms. We reveal how GPR120 differentiates rigid double bonds and flexible single bonds. The knowledge gleaned here may facilitate rational drug design targeting to GPR120.

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Primary Citation of related structures