8IB8 image
Deposition Date 2023-02-09
Release Date 2023-12-20
Last Version Date 2024-05-08
Entry Detail
PDB ID:
8IB8
Keywords:
Title:
Human TRiC-PhLP2A-actin complex in the closed state
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.42 Å
Aggregation State:
2D ARRAY
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:T-complex protein 1 subunit alpha
Gene (Uniprot):TCP1
Chain IDs:A, I
Chain Length:556
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:T-complex protein 1 subunit beta
Gene (Uniprot):CCT2
Chain IDs:B, J
Chain Length:535
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:T-complex protein 1 subunit gamma
Gene (Uniprot):CCT3
Chain IDs:C, K
Chain Length:545
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:T-complex protein 1 subunit delta
Gene (Uniprot):CCT4
Chain IDs:D, L
Chain Length:539
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:T-complex protein 1 subunit epsilon
Gene (Uniprot):CCT5
Chain IDs:E, M
Chain Length:541
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:T-complex protein 1 subunit zeta
Gene (Uniprot):CCT6A
Chain IDs:F, N
Chain Length:531
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:T-complex protein 1 subunit eta
Gene (Uniprot):CCT7
Chain IDs:G, O
Chain Length:543
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:T-complex protein 1 subunit theta
Gene (Uniprot):CCT8
Chain IDs:H, P
Chain Length:548
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Phosducin-like protein 3
Gene (Uniprot):PDCL3
Chain IDs:Q
Chain Length:239
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:ACTB protein (Fragment)
Chain IDs:R (auth: S)
Chain Length:375
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
A structural vista of phosducin-like PhLP2A-chaperonin TRiC cooperation during the ATP-driven folding cycle.
Nat Commun 15 1007 1007 (2024)
PMID: 38307855 DOI: 10.1038/s41467-024-45242-x

Abstact

Proper cellular proteostasis, essential for viability, requires a network of chaperones and cochaperones. ATP-dependent chaperonin TRiC/CCT partners with cochaperones prefoldin (PFD) and phosducin-like proteins (PhLPs) to facilitate folding of essential eukaryotic proteins. Using cryoEM and biochemical analyses, we determine the ATP-driven cycle of TRiC-PFD-PhLP2A interaction. PhLP2A binds to open apo-TRiC through polyvalent domain-specific contacts with its chamber's equatorial and apical regions. PhLP2A N-terminal H3-domain binding to subunits CCT3/4 apical domains displace PFD from TRiC. ATP-induced TRiC closure rearranges the contacts of PhLP2A domains within the closed chamber. In the presence of substrate, actin and PhLP2A segregate into opposing chambers, each binding to positively charged inner surface residues from CCT1/3/6/8. Notably, actin induces a conformational change in PhLP2A, causing its N-terminal helices to extend across the inter-ring interface to directly contact a hydrophobic groove in actin. Our findings reveal an ATP-driven PhLP2A structural rearrangement cycle within the TRiC chamber to facilitate folding.

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Primary Citation of related structures