8I74 image
Deposition Date 2023-01-31
Release Date 2024-01-31
Last Version Date 2024-10-23
Entry Detail
PDB ID:
8I74
Title:
Crystal structure of decarboxylated osteocalcin at pH 8.5
Biological Source:
Source Organism:
Bos taurus (Taxon ID: 9913)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.36 Å
R-Value Free:
0.18
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 41
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Osteocalcin
Gene (Uniprot):BGLAP
Chain IDs:A, B
Chain Length:38
Number of Molecules:2
Biological Source:Bos taurus
Primary Citation
Structural and mutational analyses of decarboxylated osteocalcin provide insight into its adiponectin-inducing activity.
Febs Lett. 597 1479 1488 (2023)
PMID: 36976525 DOI: 10.1002/1873-3468.14618

Abstact

An acidic environment in bone is essential for bone metabolism and the production of decarboxylated osteocalcin, which functions as a regulatory hormone of glucose metabolism. Here, we describe the high-resolution X-ray crystal structure of decarboxylated osteocalcin under acidic conditions. Decarboxylated osteocalcin at pH 2.0 retains the α-helix structure of native osteocalcin with three γ-carboxyglutamic acid residues at neutral pH. This implies that decarboxylated osteocalcin is stable under an acidic environment in bone. In addition, site-directed mutagenesis revealed that Glu17 and Glu21 are important for the adiponectin-inducing activity of decarboxylated osteocalcin. These findings suggest that the receptor of decarboxylated osteocalcin responds to the negative charge in helix 1 of osteocalcin.

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Primary Citation of related structures