8I4Y image
Entry Detail
PDB ID:
8I4Y
EMDB ID:
Keywords:
Title:
CalA3 complex structure with amidation product
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2023-01-21
Release Date:
2023-02-22
Method Details:
Experimental Method:
Resolution:
3.84 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Beta-ketoacyl-acyl-carrier-protein synthase I
Chain IDs:A, B
Chain Length:1719
Number of Molecules:2
Biological Source:Streptomyces chartreusis NRRL 3882
Primary Citation
C-N bond formation by a polyketide synthase.
Nat Commun 14 1319 1319 (2023)
PMID: 36899013 DOI: 10.1038/s41467-023-36989-w

Abstact

Assembly-line polyketide synthases (PKSs) are molecular factories that produce diverse metabolites with wide-ranging biological activities. PKSs usually work by constructing and modifying the polyketide backbone successively. Here, we present the cryo-EM structure of CalA3, a chain release PKS module without an ACP domain, and its structures with amidation or hydrolysis products. The domain organization reveals a unique "∞"-shaped dimeric architecture with five connected domains. The catalytic region tightly contacts the structural region, resulting in two stabilized chambers with nearly perfect symmetry while the N-terminal docking domain is flexible. The structures of the ketosynthase (KS) domain illustrate how the conserved key residues that canonically catalyze C-C bond formation can be tweaked to mediate C-N bond formation, revealing the engineering adaptability of assembly-line polyketide synthases for the production of novel pharmaceutical agents.

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