ISDA

Entry Detail

PDB ID:

8I4H

EMDB ID:

EMD-35173

Keywords:

VIRAL PROTEIN/IMMUNE SYSTEM

Title:

Omicron spike variant BA.1 with Bn03

Biological Source:

Source Organism:

Severe acute respiratory syndrome coronavirus 2, Homo sapiens

Host Organism:

Homo sapiens

PDB Version:

Deposition Date:

2023-01-19

Release Date:

2024-01-31

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.81 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:Spike glycoprotein
Mutations:R682G, R683S, R685S, F817P, A892P, A899P, A942P, K986P, V987P
Chain IDs:A
Chain Length:1285
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2

UniProt ID:P0DTC2 Pfam ID:PF16451, PF09408, PF19209, PF01601

Polymer Type:polypeptide(L)
Description:Bn03
Chain IDs:B
Chain Length:258
Number of Molecules:1
Biological Source:Homo sapiens

Ligand Molecules

Primary Citation

Defining a highly conserved cryptic epitope for antibody recognition of SARS-CoV-2 variants.

Hao, A, Song, W, Li, C, Zhang, X, Tu, C, Wang, X, Wang, P, Wu, Y, Ying, T, Sun, L.Show

Signal Transduct Target Ther 8 269 269 (2023)

PMID: 37422451 DOI: 10.1038/s41392-023-01534-0

Primary Citation of related structures