ISDA: 8I4G

Deposition Date 2023-01-19

Release Date 2023-12-27

Last Version Date 2025-07-02

Entry Detail

PDB ID:

8I4G

Keywords:

IMMUNE SYSTEM/VIRAL PROTEIN

Title:

Omicron spike variant BQ.1.1 with n3130v-Fc

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)

Host Organism:

Homo sapiens

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.68 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein
Gene (Uniprot):S
Mutagens:R682G, R683S, R685S
Chain IDs:B (auth: A)
Chain Length:1294
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2

UniProt ID:P0DTC2 Pfam ID:PF16451, PF09408, PF19209, PF01601

Polymer Type:polypeptide(L)
Molecule:n3130v-Fc
Chain IDs:A (auth: C)
Chain Length:383
Number of Molecules:1
Biological Source:Homo sapiens

Ligand Molecules

Primary Citation

Defining a highly conserved cryptic epitope for antibody recognition of SARS-CoV-2 variants.

Hao, A, Song, W, Li, C, Zhang, X, Tu, C, Wang, X, Wang, P, Wu, Y, Ying, T, Sun, L.Show

Signal Transduct Target Ther 8 269 269 (2023)

PMID: 37422451 DOI: 10.1038/s41392-023-01534-0

Primary Citation of related structures