8I2R image
Entry Detail
PDB ID:
8I2R
Keywords:
Title:
Beijerinckia indica beta-fructosyltransferase variant H395R/F473Y in complex with fructose
Biological Source:
PDB Version:
Deposition Date:
2023-01-15
Release Date:
2023-06-14
Method Details:
Experimental Method:
Resolution:
1.36 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Beta-fructosyltransferase
Mutations:variant H395R, F473Y
Chain IDs:A
Chain Length:523
Number of Molecules:1
Biological Source:Beijerinckia indica subsp. indica NBRC 3744
Primary Citation
Characterization and alteration of product specificity of Beijerinckia indica subsp. indica beta-fructosyltransferase.
Biosci.Biotechnol.Biochem. 87 981 990 (2023)
PMID: 37280168 DOI: 10.1093/bbb/zbad074

Abstact

The trisaccharide 1-kestose, a major constituent of fructooligosaccharide, has strong prebiotic effects. We used high-performance liquid chromatography and 1H nuclear magnetic resonance spectroscopy to show that BiBftA, a β-fructosyltransferase belonging to glycoside hydrolase family 68, from Beijerinckia indica subsp. indica catalyzes transfructosylation of sucrose to produce mostly 1-kestose and levan polysaccharides. We substituted His395 and Phe473 in BiBftA with Arg and Tyr, respectively, and analyzed the reactions of the mutant enzymes with 180 g/L sucrose. The ratio of the molar concentrations of glucose and 1-kestose in the reaction mixture with wild-type BiBftA was 100:8.1, whereas that in the reaction mixture with the variant H395R/F473Y was 100:45.5, indicating that H395R/F473Y predominantly accumulated 1-kestose from sucrose. The X-ray crystal structure of H395R/F473Y suggests that its catalytic pocket is unfavorable for binding of sucrose while favorable for transfructosylation.

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