8HW3 image
Entry Detail
PDB ID:
8HW3
Keywords:
Title:
Limosilactobacillus reuteri N1 GtfB-acarbose
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2022-12-28
Release Date:
2024-01-03
Method Details:
Experimental Method:
Resolution:
2.66 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:dextransucrase
Chain IDs:A, B
Chain Length:833
Number of Molecules:2
Biological Source:Limosilactobacillus reuteri
Peptide-like Molecules
PRD_900022
Primary Citation
Insights into the Structure-Function Relationship of GH70 GtfB alpha-Glucanotransferases from the Crystal Structure and Molecular Dynamic Simulation of a Newly Characterized Limosilactobacillus reuteri N1 GtfB Enzyme.
J.Agric.Food Chem. 72 5391 5402 (2024)
PMID: 38427803 DOI: 10.1021/acs.jafc.4c00104

Abstact

α-Glucanotransferases of the CAZy family GH70 convert starch-derived donors to industrially important α-glucans. Here, we describe characteristics of a novel GtfB-type 4,6-α-glucanotransferase of high enzyme activity (60.8 U mg-1) from Limosilactobacillus reuteri N1 (LrN1 GtfB), which produces surprisingly large quantities of soluble protein in heterologous expression (173 mg pure protein per L of culture) and synthesizes the reuteran-like α-glucan with (α1 → 6) linkages in linear chains and branch points. Protein structural analysis of LrN1 GtfB revealed the potential crucial residues at subsites -2∼+2, particularly H265, Y214, and R302, in the active center as well as previously unidentified surface binding sites. Furthermore, molecular dynamic simulations have provided unprecedented insights into linkage specificity hallmarks of the enzyme. Therefore, LrN1 GtfB represents a potent enzymatic tool for starch conversion, and this study promotes our knowledge on the structure-function relationship of GH70 GtfB α-glucanotransferases, which might facilitate the production of tailored α-glucans by enzyme engineering in future.

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Primary Citation of related structures