8HPR image
Deposition Date 2022-12-12
Release Date 2023-09-06
Last Version Date 2025-07-02
Entry Detail
PDB ID:
8HPR
Title:
LpqY-SugABC in state 4
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.75 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ABC sugar transporter, permease component
Chain IDs:A
Chain Length:305
Number of Molecules:1
Biological Source:Mycolicibacterium smegmatis MC2 155
Polymer Type:polypeptide(L)
Molecule:ABC transporter, permease protein SugB
Gene (Uniprot):MSMEG_5059
Chain IDs:B
Chain Length:278
Number of Molecules:1
Biological Source:Mycolicibacterium smegmatis MC2 155
Polymer Type:polypeptide(L)
Molecule:ABC transporter, ATP-binding protein SugC
Gene (Uniprot):MSMEG_5058
Mutations:E164N
Chain IDs:C, D
Chain Length:406
Number of Molecules:2
Biological Source:Mycolicibacterium smegmatis MC2 155
Polymer Type:polypeptide(L)
Molecule:Bacterial extracellular solute-binding protein
Gene (Uniprot):MSMEG_5061
Chain IDs:E
Chain Length:465
Number of Molecules:1
Biological Source:Mycolicibacterium smegmatis MC2 155
Primary Citation
Structural insights into trehalose capture and translocation by mycobacterial LpqY-SugABC.
Structure 31 1158 1165.e3 (2023)
PMID: 37619560 DOI: 10.1016/j.str.2023.07.014

Abstact

The human pathogen, Mycobacterium tuberculosis (Mtb) relies heavily on trehalose for both survival and pathogenicity. The type I ATP-binding cassette (ABC) transporter LpqY-SugABC is the only trehalose import pathway in Mtb. Conformational dynamics of ABC transporters is an important feature to explain how they operate, but experimental structures are determined in a static environment. Therefore, a detailed transport mechanism cannot be elucidated because there is a lack of intermediate structures. Here, we used single-particle cryo-electron microscopy (cryo-EM) to determine the structure of the Mycobacterium smegmatis (M. smegmatis) trehalose-specific importer LpqY-SugABC complex in five different conformations. These structures have been classified and reconstructed from a single cryo-EM dataset. This study allows a comprehensive understanding of the trehalose recycling mechanism in Mycobacteria and also demonstrates the potential of single-particle cryo-EM to explore the dynamic structures of other ABC transporters and molecular machines.

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Primary Citation of related structures