8HPD image
Deposition Date 2022-12-12
Release Date 2023-09-06
Last Version Date 2025-07-02
Entry Detail
PDB ID:
8HPD
Keywords:
Title:
Bry-LHCII heterotrimer of Bryopsis corticulans
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.74 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:siphonaxanthin chlorophyll a/b binding light-harvesting complex II, Bry-Lhcb1
Chain IDs:A
Chain Length:249
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:siphonaxanthin chlorophyll a/b binding light-harvesting complex II, Bry-Lhcb3
Chain IDs:B
Chain Length:253
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:siphonaxanthin chlorophyll a/b binding light-harvesting complex II, Bry-Lhcb2
Chain IDs:C
Chain Length:256
Number of Molecules:1
Biological Source:Bryopsis corticulans
Primary Citation
Structural and functional properties of different types of siphonous LHCII trimers from an intertidal green alga Bryopsis corticulans.
Structure 31 1247 1258.e3 (2023)
PMID: 37633266 DOI: 10.1016/j.str.2023.08.001

Abstact

Light-harvesting complexes of photosystem II (LHCIIs) in green algae and plants are vital antenna apparatus for light harvesting, energy transfer, and photoprotection. Here we determined the structure of a siphonous-type LHCII trimer from the intertidal green alga Bryopsis corticulans by X-ray crystallography and cryo-electron microscopy (cryo-EM), and analyzed its functional properties by spectral analysis. The Bryopsis LHCII (Bry-LHCII) structures in both homotrimeric and heterotrimeric form show that green light-absorbing siphonaxanthin and siphonein occupied the sites of lutein and violaxanthin in plant LHCII, and two extra chlorophylls (Chls) b replaced Chls a. Binding of these pigments expands the blue-green light absorption of B. corticulans in the tidal zone. We observed differences between the Bry-LHCII homotrimer crystal and cryo-EM structures, and also between Bry-LHCII homotrimer and heterotrimer cryo-EM structures. These conformational changes may reflect the flexibility of Bry-LHCII, which may be required to adapt to light fluctuations from tidal rhythms.

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