8HN4 image
Deposition Date 2022-12-07
Release Date 2023-12-27
Last Version Date 2024-10-30
Entry Detail
PDB ID:
8HN4
Keywords:
IMMUNE SYSTEM
Title:
Complex structure of HLA2402 with recognizing SARS-CoV-2 epitope QYIKWPWYI
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.85 Å
R-Value Free:
0.25
R-Value Work:
0.21
Space Group:
P 21 21 21
8HN4 validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:MHC class I antigen
Gene (Uniprot):HLA-A
Chain IDs:A
Chain Length:308
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:F6IR24 Pfam ID:PF00129, PF07654
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2M
Chain IDs:B
Chain Length:100
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P61769 Pfam ID:PF07654
Protein Blast
Polymer Type:polypeptide(L)
Molecule:SARS-CoV-2 T-cell epitope QYIKWPWYI
Chain IDs:C (auth: E)
Chain Length:9
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTC2
Ligand Molecules
NA
Primary Citation
Immune escape at SARS- CoV-2 killer T cell epitope
To be published ? ? ? (?)
Primary Citation of related structures
8HN4