8HM0 image
Deposition Date 2022-12-02
Release Date 2023-05-31
Last Version Date 2023-12-13
Entry Detail
PDB ID:
8HM0
Keywords:
Title:
F8-A22-E4 complex of MPXV in trimeric form
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DNA polymerase
Chain IDs:B (auth: A)
Chain Length:1006
Number of Molecules:1
Biological Source:Monkeypox virus
Polymer Type:polypeptide(L)
Molecule:E4R
Chain IDs:C (auth: B)
Chain Length:218
Number of Molecules:1
Biological Source:Monkeypox virus
Polymer Type:polypeptide(L)
Molecule:DNA polymerase processivity factor component A20
Chain IDs:A (auth: C)
Chain Length:426
Number of Molecules:1
Biological Source:Monkeypox virus
Ligand Molecules
Primary Citation
Structural basis for the assembly of the DNA polymerase holoenzyme from a monkeypox virus variant.
Sci Adv 9 eadg2331 eadg2331 (2023)
PMID: 37075110 DOI: 10.1126/sciadv.adg2331

Abstact

The ongoing global pandemic caused by a variant of the monkeypox (or mpox) virus (MPXV) has prompted widespread concern. The MPXV DNA polymerase holoenzyme, consisting of F8, A22, and E4, is vital for replicating the viral genome and represents a crucial target for the development of antiviral drugs. However, the assembly and working mechanism for the DNA polymerase holoenzyme of MPXV remains elusive. Here, we present the cryo-electron microscopy (cryo-EM) structure of the DNA polymerase holoenzyme at an overall resolution of 3.5 Å. Unexpectedly, the holoenzyme is assembled as a dimer of heterotrimers, of which the extra interface between the thumb domain of F8 and A22 shows a clash between A22 and substrate DNA, suggesting an autoinhibition state. Addition of exogenous double-stranded DNA shifts the hexamer into trimer exposing DNA binding sites, potentially representing a more active state. Our findings provide crucial steps toward developing targeted antiviral therapies for MPXV and related viruses.

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Primary Citation of related structures