8HHE image
Entry Detail
PDB ID:
8HHE
Keywords:
Title:
Crystal structure of Cry5B from Bacillus thuringiensis at 4.5 A resolution
Biological Source:
PDB Version:
Deposition Date:
2022-11-16
Release Date:
2022-12-07
Method Details:
Experimental Method:
Resolution:
4.50 Å
R-Value Free:
0.28
R-Value Work:
0.23
R-Value Observed:
0.24
Space Group:
P 4 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Crystaline entomocidal protoxin
Chain IDs:A, B
Chain Length:808
Number of Molecules:2
Biological Source:Bacillus thuringiensis YBT-1518
Ligand Molecules
Primary Citation
Insights from the Structure of an Active Form of Bacillus thuringiensis Cry5B.
Toxins 14 ? ? (2022)
PMID: 36548720 DOI: 10.3390/toxins14120823

Abstact

The crystal protein Cry5B, a pore-forming protein produced by the soil bacterium Bacillus thuringiensis, has been demonstrated to have excellent anthelmintic activity. While a previous structure of the three-domain core region of Cry5B(112-698) had been reported, this structure lacked a key N-terminal extension critical to function. Here we report the structure of Cry5B(27-698) containing this N-terminal extension. This new structure adopts a distinct quaternary structure compared to the previous Cry5B(112-698) structure, and also exhibits a change in the conformation of residues 112-140 involved in linking the N-terminal extension to the three-domain core by forming a random coil and an extended α-helix. A role for the N-terminal extension is suggested based on a computational model of the tetramer with the conformation of residues 112-140 in its alternate α-helix conformation. Finally, based on the Cry5B(27-698) structure, site-directed mutagenesis studies were performed on Tyr495, which revealed that having an aromatic group or bulky group at this residue 495 is important for Cry5B toxicity.

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