8HG9 image
Deposition Date 2022-11-14
Release Date 2023-07-26
Last Version Date 2024-05-29
Entry Detail
PDB ID:
8HG9
Keywords:
Title:
Cytochrome P450 steroid hydroxylase (BaCYP106A6) from Bacillus species
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.79 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:cytochrome P450 steroid hydroxylase
Chain IDs:A, B
Chain Length:410
Number of Molecules:2
Biological Source:Bacillus sp. (in: Bacteria)
Ligand Molecules
Primary Citation
Crystal Structure and Biochemical Analysis of a Cytochrome P450 Steroid Hydroxylase ( Ba CYP106A6) from Bacillus Species.
J Microbiol Biotechnol. 33 387 397 (2023)
PMID: 36655276 DOI: 10.4014/jmb.2211.11031

Abstact

Cytochrome P450 (CYP) is a heme-containing enzyme that catalyzes hydroxylation reactions with various substrate molecules. Steroid hydroxylases are particularly useful for effectively introducing hydroxyl groups into a wide range of steroids in the pharmaceutical industry. This study reports a newly identified CYP steroid hydroxylase (BaCYP106A6) from the bacterium Bacillus sp. and characterizes it using an in vitro enzyme assay and structural investigation. Bioconversion assays indicated that BaCYP106A1 catalyzes the hydroxylation of progesterone and androstenedione, whereas no or low conversion was observed with 11β-hydroxysteroids such as cortisol, corticosterone, dexamethasone, and prednisolone. In addition, the crystal structure of BaCYP106A6 was determined at a resolution of 2.8 Å to investigate the configuration of the substrate-binding site and understand substrate preference. This structural characterization and comparison with other bacterial steroid hydroxylase CYPs allowed us to identify a unique Arg295 residue that may serve as the key residue for substrate specificity and regioselectivity in BaCYP106A6. This observation provides valuable background for further protein engineering to design commercially useful CYP steroid hydroxylases with different substrate specificities.

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Primary Citation of related structures