8HE1 image
Entry Detail
PDB ID:
8HE1
Keywords:
Title:
The structure of chitin deacetylase Pst_13661 from Puccinia striiformis f. sp. tritici
Biological Source:
PDB Version:
Deposition Date:
2022-11-07
Release Date:
2023-05-31
Method Details:
Experimental Method:
Resolution:
1.61 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Chitin deacetylase
Chain IDs:A
Chain Length:280
Number of Molecules:1
Biological Source:Puccinia striiformis f. sp. tritici
Primary Citation
Inhibition of chitin deacetylases to attenuate plant fungal diseases.
Nat Commun 14 3857 3857 (2023)
PMID: 37385996 DOI: 10.1038/s41467-023-39562-7

Abstact

Phytopathogenic fungi secrete chitin deacetylase (CDA) to escape the host's immunological defense during infection. Here, we showed that the deacetylation activity of CDA toward chitin is essential for fungal virulence. Five crystal structures of two representative and phylogenetically distant phytopathogenic fungal CDAs, VdPDA1 from Verticillium dahliae and Pst_13661 from Puccinia striiformis f. sp. tritici, were obtained in ligand-free and inhibitor-bound forms. These structures suggested that both CDAs have an identical substrate-binding pocket and an Asp-His-His triad for coordinating a transition metal ion. Based on the structural identities, four compounds with a benzohydroxamic acid (BHA) moiety were obtained as phytopathogenic fungal CDA inhibitors. BHA exhibited high effectiveness in attenuating fungal diseases in wheat, soybean, and cotton. Our findings revealed that phytopathogenic fungal CDAs share common structural features, and provided BHA as a lead compound for the design of CDA inhibitors aimed at attenuating crop fungal diseases.

Legend

Protein

Chemical

Disease

Primary Citation of related structures