8HDS image
Entry Detail
PDB ID:
8HDS
EMDB ID:
Keywords:
Title:
Cyanophage Pam3 portal-adaptor
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2022-11-06
Release Date:
2023-01-18
Method Details:
Experimental Method:
Resolution:
3.57 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Pam3 portal protein
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:621
Number of Molecules:12
Biological Source:uncultured cyanophage
Polymer Type:polypeptide(L)
Description:Pam3 adaptor protein
Chain IDs:M (auth: a), N (auth: b), O (auth: c), P (auth: d), Q (auth: e), R (auth: f), S (auth: g), T (auth: h), U (auth: i), V (auth: j), W (auth: k), X (auth: l)
Chain Length:621
Number of Molecules:12
Biological Source:uncultured cyanophage
Ligand Molecules
Primary Citation
Fine structure and assembly pattern of a minimal myophage Pam3.
Proc.Natl.Acad.Sci.USA 120 e2213727120 e2213727120 (2023)
PMID: 36656854 DOI: 10.1073/pnas.2213727120

Abstact

The myophage possesses a contractile tail that penetrates its host cell envelope. Except for investigations on the bacteriophage T4 with a rather complicated structure, the assembly pattern and tail contraction mechanism of myophage remain largely unknown. Here, we present the fine structure of a freshwater Myoviridae cyanophage Pam3, which has an icosahedral capsid of ~680 Å in diameter, connected via a three-section neck to an 840-Å-long contractile tail, ending with a three-module baseplate composed of only six protein components. This simplified baseplate consists of a central hub-spike surrounded by six wedge heterotriplexes, to which twelve tail fibers are covalently attached via disulfide bonds in alternating upward and downward configurations. In vitro reduction assays revealed a putative redox-dependent mechanism of baseplate assembly and tail sheath contraction. These findings establish a minimal myophage that might become a user-friendly chassis phage in synthetic biology.

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Primary Citation of related structures