8HDD image
Entry Detail
PDB ID:
8HDD
Keywords:
Title:
Complex structure of catalytic, small, and a partial electron transfer subunits from Burkholderia cepacia FAD glucose dehydrogenase
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2022-11-04
Release Date:
2022-12-14
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.32
R-Value Work:
0.27
R-Value Observed:
0.27
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Glucose dehydrogenase
Chain IDs:A
Chain Length:539
Number of Molecules:1
Biological Source:Burkholderia cepacia
Polymer Type:polypeptide(L)
Description:Glucose dehydrogenase beta subunit
Chain IDs:B
Chain Length:482
Number of Molecules:1
Biological Source:Burkholderia cepacia
Polymer Type:polypeptide(L)
Description:Twin-arginine translocation pathway signal
Chain IDs:C
Chain Length:121
Number of Molecules:1
Biological Source:Burkholderia cepacia
Primary Citation
Microgravity environment grown crystal structure information based engineering of direct electron transfer type glucose dehydrogenase.
Commun Biol 5 1334 1334 (2022)
PMID: 36473944 DOI: 10.1038/s42003-022-04286-9

Abstact

The heterotrimeric flavin adenine dinucleotide dependent glucose dehydrogenase is a promising enzyme for direct electron transfer (DET) principle-based glucose sensors within continuous glucose monitoring systems. We elucidate the structure of the subunit interface of this enzyme by preparing heterotrimer complex protein crystals grown under a space microgravity environment. Based on the proposed structure, we introduce inter-subunit disulfide bonds between the small and electron transfer subunits (5 pairs), as well as the catalytic and the electron transfer subunits (9 pairs). Without compromising the enzyme's catalytic efficiency, a mutant enzyme harboring Pro205Cys in the catalytic subunit, Asp383Cys and Tyr349Cys in the electron transfer subunit, and Lys155Cys in the small subunit, is determined to be the most stable of the variants. The developed engineered enzyme demonstrate a higher catalytic activity and DET ability than the wild type. This mutant retains its full activity below 70 °C as well as after incubation at 75 °C for 15 min - much higher temperatures than the current gold standard enzyme, glucose oxidase, is capable of withstanding.

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