ISDA: 8H7G

Deposition Date 2022-10-20

Release Date 2022-12-14

Last Version Date 2024-10-16

Entry Detail

PDB ID:

8H7G

Keywords:

TRANSCRIPTION

Title:

Cryo-EM structure of the human SAGA complex

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Homo sapiens

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.70 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Splicing factor 3B subunit 3
Gene (Uniprot):SF3B3
Chain IDs:B (auth: A)
Chain Length:1217
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q15393 Pfam ID:PF10433, PF03178

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Splicing factor 3B subunit 5
Gene (Uniprot):SF3B5
Chain IDs:C (auth: B)
Chain Length:86
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q9BWJ5 Pfam ID:PF07189

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Transformation/transcription domain-associated protein
Gene (Uniprot):TRRAP
Chain IDs:A (auth: C)
Chain Length:3859
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q9Y4A5 Pfam ID:PF20175, PF20206, PF02259, PF00454

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Transcription factor SPT20 homolog
Gene (Uniprot):SUPT20H
Chain IDs:D
Chain Length:779
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q8NEM7 Pfam ID:PF12090

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Transcription initiation protein SPT3 homolog
Gene (Uniprot):SUPT3H
Chain IDs:E
Chain Length:317
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:O75486 Pfam ID:PF02269

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Transcriptional adapter 1
Gene (Uniprot):TADA1
Chain IDs:F (auth: G)
Chain Length:374
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q96BN2 Pfam ID:PF12767

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
Gene (Uniprot):TAF5L
Chain IDs:G (auth: H)
Chain Length:589
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:O75529 Pfam ID:PF04494, PF00400

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:STAGA complex 65 subunit gamma
Gene (Uniprot):SUPT7L
Chain IDs:H (auth: I)
Chain Length:455
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:O94864 Pfam ID:PF07524

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
Gene (Uniprot):TAF6L
Chain IDs:I (auth: K)
Chain Length:622
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q9Y6J9 Pfam ID:PF02969, PF07571

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ataxin-7
Gene (Uniprot):ATXN7
Chain IDs:N (auth: L)
Chain Length:892
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:O15265 Pfam ID:PF08313

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 9
Gene (Uniprot):TAF9
Chain IDs:J (auth: M)
Chain Length:264
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q16594 Pfam ID:PF02291

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 10
Gene (Uniprot):TAF10
Chain IDs:K (auth: O)
Chain Length:218
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q12962 Pfam ID:PF03540

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 12
Gene (Uniprot):TAF12
Chain IDs:L (auth: R)
Chain Length:161
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q16514 Pfam ID:PF03847

Polymer Type:polypeptide(L)
Molecule:Unassigned sequence
Chain IDs:M (auth: X)
Chain Length:19
Number of Molecules:1
Biological Source:Homo sapiens

Ligand Molecules

Primary Citation

Cryo-EM structure of human SAGA transcriptional coactivator complex.

Zhang, Y, Yin, C, Yin, Y, Wei, M, Jing, W, Peng, C, Chen, Z, Huang, J.Show

Cell Discov 8 125 125 (2022)

PMID: 36414614 DOI: 10.1038/s41421-022-00489-w

Primary Citation of related structures

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