8H2H image
Deposition Date 2022-10-06
Release Date 2022-11-23
Last Version Date 2024-11-13
Entry Detail
PDB ID:
8H2H
Title:
Cryo-EM structure of a Group II Intron Complexed with its Reverse Transcriptase
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polyribonucleotide
Molecule:LtrB
Chain IDs:A
Chain Length:902
Number of Molecules:1
Biological Source:Lactococcus lactis
Polymer Type:polyribonucleotide
Molecule:RNA (5'-R(P*CP*AP*CP*AP*UP*CP*CP*AP*UP*AP*AP*C)-3')
Chain IDs:B
Chain Length:12
Number of Molecules:1
Biological Source:Lactococcus lactis
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Group II intron-encoded protein LtrA
Gene (Uniprot):ltrA
Chain IDs:C (auth: D)
Chain Length:599
Number of Molecules:1
Biological Source:Lactococcus lactis
Ligand Molecules
Primary Citation
Functionalized graphene grids with various charges for single-particle cryo-EM.
Nat Commun 13 6718 6718 (2022)
PMID: 36344519 DOI: 10.1038/s41467-022-34579-w

Abstact

A major hurdle for single particle cryo-EM in structural determination lies in the specimen preparation impaired by the air-water interface (AWI) and preferential particle-orientation problems. In this work, we develop functionalized graphene grids with various charges via a dediazoniation reaction for cryo-EM specimen preparation. The graphene grids are paraffin-assistant fabricated, which appear with less contaminations compared with those produced by polymer transfer method. By applying onto three different types of macromolecules, we demonstrate that the high-yield charged graphene grids bring macromolecules away from the AWI and enable adjustable particle-orientation distribution for more robust single particle cryo-EM structural determination.

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Primary Citation of related structures
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