8H0G image
Entry Detail
PDB ID:
8H0G
Keywords:
Title:
AQEE-30 in a HFIP solution
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2022-09-28
Release Date:
2022-12-14
Method Details:
Experimental Method:
Conformers Calculated:
20
Conformers Submitted:
20
Selection Criteria:
all calculated structures submitted
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:AQEE-30
Chain IDs:A
Chain Length:31
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure of AQEE-30 of VGF Neuropeptide in Membrane-Mimicking Environments.
Int J Mol Sci 23 ? ? (2022)
PMID: 36430431 DOI: 10.3390/ijms232213953

Abstact

AQEE-30 is one of the VGF peptides, which are derived from the VGF polypeptide precursor, and related to various physiological phenomena including neuroprotective effects in Huntington's disease and amyotrophic lateral sclerosis (ALS). Although various functions of AQEE-30 have been reported so far, the structure of this peptide has not been reported yet. In this study, the structure of human AQEE-30 was investigated in hexafluoroisopropanol (HFIP) and dodecyl phosphocholine (DPC) micelle solutions, using circular dichroism (CD) and nuclear magnetic resonance (NMR) spectroscopy. CD results showed that AQEE-30 had a partial helical structure in aqueous buffer, and the helical structure was stabilized in the HFIP and DPC micelle solutions. The 3D structures determined by NMR spectroscopy showed that AQEE-30 adopted mainly α-helical structure in both the HFIP and DPC micelle solutions. The surface of AQEE-30 showed that it was predominantly negatively charged. The residues from 601 to 611 in both the HFIP and DPC micelle solutions showed amphiphilicity with four negatively charged residues, glutamate. The C-terminal consecutive arginine residues formed a partial positively charged surface. These results suggest an α-helical active structure of AQEE-30 in the cell-membrane environment.

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Primary Citation of related structures