8GYK image
Deposition Date 2022-09-22
Release Date 2023-08-30
Last Version Date 2023-08-30
Entry Detail
PDB ID:
8GYK
Keywords:
Title:
CryoEM structure of the RAD51_ADP filament
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.14 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA repair protein RAD51 homolog 1
Gene (Uniprot):RAD51
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:339
Number of Molecules:8
Biological Source:Homo sapiens
Primary Citation
A RAD51-ADP double filament structure unveils the mechanism of filament dynamics in homologous recombination.
Nat Commun 14 4993 4993 (2023)
PMID: 37591853 DOI: 10.1038/s41467-023-40672-5

Abstact

ATP-dependent RAD51 recombinases play an essential role in eukaryotic homologous recombination by catalyzing a four-step process: 1) formation of a RAD51 single-filament assembly on ssDNA in the presence of ATP, 2) complementary DNA strand-exchange, 3) ATP hydrolysis transforming the RAD51 filament into an ADP-bound disassembly-competent state, and 4) RAD51 disassembly to provide access for DNA repairing enzymes. Of these steps, filament dynamics between the ATP- and ADP-bound states, and the RAD51 disassembly mechanism, are poorly understood due to the lack of near-atomic-resolution information of the ADP-bound RAD51-DNA filament structure. We report the cryo-EM structure of ADP-bound RAD51-DNA filaments at 3.1 Å resolution, revealing a unique RAD51 double-filament that wraps around ssDNA. Structural analysis, supported by ATP-chase and time-resolved cryo-EM experiments, reveals a collapsing mechanism involving two four-protomer movements along ssDNA for mechanical transition between RAD51 single- and double-filament without RAD51 dissociation. This mechanism enables elastic change of RAD51 filament length during structural transitions between ATP- and ADP-states.

Legend

Protein

Chemical

Disease

Primary Citation of related structures