8GMO image
Deposition Date 2023-03-26
Release Date 2023-05-10
Last Version Date 2024-06-19
Entry Detail
PDB ID:
8GMO
Title:
Bacteriophage T4 capsid shell containing 9DE insertions into the gp23* major capsid protein subunits
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Mature major capsid protein
Gene (Uniprot):gp23
Chain IDs:A (auth: 0), B (auth: 1), C (auth: 2), D (auth: 3), E (auth: 4), F (auth: 5), G (auth: 6), H (auth: 7), I (auth: 8), J (auth: 9), L (auth: AA), M (auth: AB), N (auth: AC), O (auth: AD), P (auth: AE), Q (auth: AF), R (auth: AG), S (auth: AH), T (auth: AI), U (auth: AJ), V (auth: AK), W (auth: AL), X (auth: AM), Y (auth: AN), Z (auth: AO), AA (auth: AP), BA (auth: AQ), CA (auth: AR), DA (auth: AS), EA (auth: AT), FA (auth: AU), GA (auth: AV), HA (auth: AW), IA (auth: AX), JA (auth: AY), KA (auth: AZ), LA (auth: Aa), MA (auth: Ab), NA (auth: Ac), OA (auth: Ad), PA (auth: Ae), QA (auth: Af), RA (auth: Ag), SA (auth: Ah), TA (auth: Ai), UA (auth: Aj), VA (auth: Ak), WA (auth: Al), XA (auth: Am), BB (auth: G), CB (auth: H), DB (auth: J), EB (auth: K), FB (auth: L), GB (auth: M), HB (auth: N), IB (auth: O), JB (auth: P), KB (auth: Q), LB (auth: R), MB (auth: S), NB (auth: T), OB (auth: U), PB (auth: V), QB (auth: W), RB (auth: X), SB (auth: Y), TB (auth: Z), VB (auth: b), WB (auth: c), XB (auth: d), YB (auth: e), ZB (auth: f), AC (auth: g), BC (auth: h), CC (auth: i), DC (auth: j), EC (auth: k), FC (auth: l), GC (auth: m), HC (auth: n), IC (auth: o), JC (auth: p), KC (auth: q), LC (auth: r), MC (auth: s), NC (auth: t), OC (auth: u), PC (auth: v), QC (auth: w), RC (auth: x), SC (auth: y), TC (auth: z)
Chain Length:465
Number of Molecules:93
Biological Source:Tequatrovirus T4
Polymer Type:polypeptide(L)
Molecule:Mature capsid vertex protein
Gene (Uniprot):24
Chain IDs:K (auth: A), YA (auth: B), ZA (auth: C), AB (auth: D), UB (auth: a)
Chain Length:415
Number of Molecules:5
Biological Source:Tequatrovirus T4
Ligand Molecules
Primary Citation
Design of bacteriophage T4-based artificial viral vectors for human genome remodeling.
Nat Commun 14 2928 2928 (2023)
PMID: 37253769 DOI: 10.1038/s41467-023-38364-1

Abstact

Designing artificial viral vectors (AVVs) programmed with biomolecules that can enter human cells and carry out molecular repairs will have broad applications. Here, we describe an assembly-line approach to build AVVs by engineering the well-characterized structural components of bacteriophage T4. Starting with a 120 × 86 nm capsid shell that can accommodate 171-Kbp DNA and thousands of protein copies, various combinations of biomolecules, including DNAs, proteins, RNAs, and ribonucleoproteins, are externally and internally incorporated. The nanoparticles are then coated with cationic lipid to enable efficient entry into human cells. As proof of concept, we assemble a series of AVVs designed to deliver full-length dystrophin gene or perform various molecular operations to remodel human genome, including genome editing, gene recombination, gene replacement, gene expression, and gene silencing. These large capacity, customizable, multiplex, and all-in-one phage-based AVVs represent an additional category of nanomaterial that could potentially transform gene therapies and personalized medicine.

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Primary Citation of related structures