8GL4 image
Entry Detail
PDB ID:
8GL4
Keywords:
Title:
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2023-03-20
Release Date:
2023-11-15
Method Details:
Experimental Method:
Resolution:
0.76 Å
R-Value Free:
0.10
R-Value Work:
0.10
R-Value Observed:
0.10
Space Group:
P 21 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:bipyridyl-conjugated helical peptide
Chain IDs:A
Chain Length:11
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc. 145 19588 19600 (2023)
PMID: 37639365 DOI: 10.1021/jacs.3c03645

Abstact

Though thiols are exceptionally versatile, their high reactivity has also hindered the synthesis and characterization of well-defined thiol-containing porous materials. Leveraging the mild conditions of the noncovalent peptide assembly, we readily synthesized and characterized a number of frameworks with thiols displayed at many unique positions and in several permutations. Importantly, nearly all assemblies were structurally determined using single-crystal X-ray diffraction to reveal their rich sequence-structure landscape and the cooperative noncovalent interactions underlying their assembly. These observations and supporting molecular dynamics calculations enabled rational engineering by the positive and negative design of noncovalent interactions. Furthermore, the thiol-containing frameworks undergo diverse single-crystal-to-single-crystal reactions, including toxic metal ion coordination (e.g., Cd2+, Pb2+, and Hg2+), selective uptake of Hg2+ ions, and redox transformations. Notably, we find a framework that supports thiol-nitrosothiol interconversion, which is applicable for biocompatible nitric oxide delivery. The modularity, ease of synthesis, functionality, and well-defined nature of these peptide-based thiol frameworks are expected to accelerate the design of complex materials with reactive active sites.

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