8GJU image
Entry Detail
PDB ID:
8GJU
Title:
Crystal structure of human methylmalonyl-CoA mutase (MMUT) in complex with methylmalonic acidemia type A protein (MMAA), coenzyme A, and GDP
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2023-03-16
Release Date:
2023-08-09
Method Details:
Experimental Method:
Resolution:
2.79 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.23
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Methylmalonic aciduria type A protein, mitochondrial
Chain IDs:A (auth: D), B (auth: F), F (auth: A), G (auth: B)
Chain Length:349
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Methylmalonyl-CoA mutase, mitochondrial
Chain IDs:C (auth: J), D (auth: K), E (auth: L), H
Chain Length:748
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
Architecture of the human G-protein-methylmalonyl-CoA mutase nanoassembly for B 12 delivery and repair.
Nat Commun 14 4332 4332 (2023)
PMID: 37468522 DOI: 10.1038/s41467-023-40077-4

Abstact

G-proteins function as molecular switches to power cofactor translocation and confer fidelity in metal trafficking. The G-protein, MMAA, together with MMAB, an adenosyltransferase, orchestrate cofactor delivery and repair of B12-dependent human methylmalonyl-CoA mutase (MMUT). The mechanism by which the complex assembles and moves a >1300 Da cargo, or fails in disease, are poorly understood. Herein, we report the crystal structure of the human MMUT-MMAA nano-assembly, which reveals a dramatic 180° rotation of the B12 domain, exposing it to solvent. The complex, stabilized by MMAA wedging between two MMUT domains, leads to ordering of the switch I and III loops, revealing the molecular basis of mutase-dependent GTPase activation. The structure explains the biochemical penalties incurred by methylmalonic aciduria-causing mutations that reside at the MMAA-MMUT interfaces we identify here.

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