ISDA

Deposition Date 2023-03-13

Release Date 2024-03-27

Last Version Date 2025-04-02

Entry Detail

PDB ID:

8GI0

Keywords:

PROTEIN TRANSPORT

Title:

Structure of Trypanosoma docking complex

Biological Source:

Source Organism:

Trypanosoma cruzi (Taxon ID: 5693)
Trypanosoma cruzi strain CL Brener (Taxon ID: 353153)
Trypanosoma cruzi cruzi (Taxon ID: 85057)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.50 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:malate dehydrogenase
Gene (Uniprot):Tc00.1047053506503.69
Chain IDs:B (auth: A), C (auth: B), D (auth: C), E (auth: D)
Chain Length:323
Number of Molecules:4
Biological Source:Trypanosoma cruzi strain CL Brener

UniProt ID:Q4DRD8 Pfam ID:PF00056, PF02866

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Peroxisome targeting signal 1 receptor
Gene (Uniprot):TCDM_08436
Chain IDs:F (auth: E)
Chain Length:666
Number of Molecules:1
Biological Source:Trypanosoma cruzi cruzi

UniProt ID:V5B7T1 Pfam ID:PF13432

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Peroxisomal membrane protein PEX14
Gene (Uniprot):C3747_80g13
Chain IDs:A (auth: F)
Chain Length:372
Number of Molecules:1
Biological Source:Trypanosoma cruzi

UniProt ID:A0A2V2WKZ5 Pfam ID:PF04695

Ligand Molecules

Primary Citation

Noncanonical interactions and conformational dynamics in cargo-Pex5-Pex14 ternary complex for peroxisomal import

Sonani, R.R, Blat, A, Jemiola-Rzeminska, M, Lipinski, O, Patel, S.N, Sood, T, Dubin, G.Show

Biorxiv ? ? ? (2023)

DOI: 10.1101/2023.04.03.535445

Primary Citation of related structures