8GHZ image
Deposition Date 2023-03-13
Release Date 2023-11-08
Last Version Date 2024-11-13
Entry Detail
PDB ID:
8GHZ
Keywords:
Title:
Cryo-EM structure of fish immunogloblin M-Fc
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.78 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Teleost immunoglobulin M protein
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:237
Number of Molecules:8
Biological Source:Oncorhynchus mykiss
Ligand Molecules
Primary Citation
The structure of the teleost Immunoglobulin M core provides insights on polymeric antibody evolution, assembly, and function.
Nat Commun 14 7583 7583 (2023)
PMID: 37989996 DOI: 10.1038/s41467-023-43240-z

Abstact

Polymeric (p) immunoglobulins (Igs) serve broad functions during vertebrate immune responses. Typically, pIgs contain between two and six Ig monomers, each with two antigen binding fragments and one fragment crystallization (Fc). In addition, many pIgs assemble with a joining-chain (JC); however, the number of monomers and potential to include JC vary with species and heavy chain class. Here, we report the cryo-electron microscopy structure of IgM from a teleost (t) species, which does not encode JC. The structure reveals four tIgM Fcs linked through eight C-terminal tailpieces (Tps), which adopt a single β-sandwich-like domain (Tp assembly) located between two Fcs. Specifically, two of eight heavy chains fold uniquely, resulting in a structure distinct from mammalian IgM, which typically contains five IgM monomers, one JC and a centrally-located Tp assembly. Together with mutational analysis, structural data indicate that pIgs have evolved a range of assembly mechanisms and structures, each likely to support unique antibody effector functions.

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Primary Citation of related structures