8GBE image
Deposition Date 2023-02-25
Release Date 2023-03-15
Last Version Date 2024-05-22
Entry Detail
PDB ID:
8GBE
Keywords:
Title:
Structure of a viral gasdermin protein A47 from Eptesipox virus
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.46 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
C 2 2 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein A47
Gene (Uniprot):EPTV-WA-146
Chain IDs:A
Chain Length:207
Number of Molecules:1
Biological Source:Eptesipox virus
Primary Citation
Structural homology screens reveal poxvirus-encoded proteins impacting inflammasome-mediated defenses.
Biorxiv ? ? ? (2023)
PMID: 36909515 DOI: 10.1101/2023.02.26.529821

Abstact

Viruses acquire host genes via horizontal gene transfer and can express them to manipulate host biology during infections. Some viral and host homologs retain sequence identity, but evolutionary divergence can obscure host origins. We used structural modeling to compare vaccinia virus proteins with metazoan proteomes. We identified vaccinia A47L as a homolog of gasdermins, the executioners of pyroptosis. An X-ray crystal structure of A47 confirmed this homology and cell-based assays revealed that A47 inhibits pyroptosis. We also identified vaccinia C1L as the product of a cryptic gene fusion event coupling a Bcl-2 related fold with a pyrin domain. C1 associates with components of the inflammasome, a cytosolic innate immune sensor involved in pyroptosis, yet paradoxically enhances inflammasome activity, suggesting a benefit to poxvirus replication in some circumstances. Our findings demonstrate the potential of structural homology screens to reveal genes that viruses capture from hosts and repurpose to benefit viral fitness.

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