8G78 image
Deposition Date 2023-02-16
Release Date 2024-02-21
Last Version Date 2024-10-30
Entry Detail
PDB ID:
8G78
Keywords:
VIRAL PROTEIN/IMMUNE SYSTEM
Title:
Local refinement of SARS-CoV-2 spike/nanobody mixture complex around NTD
Biological Source:
Source Organism:
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Vicugna pacos (Taxon ID: 30538)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.40 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8G78 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein
Gene (Uniprot):S
Chain IDs:A, B, C (auth: D)
Chain Length:1234
Number of Molecules:3
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTC2 Pfam ID:PF16451, PF09408, PF19209, PF01601
Polymer Type:polypeptide(L)
Molecule:Nanosota-6
Chain IDs:E (auth: F), F (auth: G), I (auth: E)
Chain Length:139
Number of Molecules:3
Biological Source:Vicugna pacos
Polymer Type:polypeptide(L)
Molecule:Nanosota-5
Chain IDs:D (auth: J), G (auth: H), H (auth: I)
Chain Length:135
Number of Molecules:3
Biological Source:Vicugna pacos
Ligand Molecules
NAG
Primary Citation
Local refinement of SARS-CoV-2 spike/nanobody mixture complex around NTD
To Be Published ? ? ? (?)
Primary Citation of related structures
8G78