8FZC image
Entry Detail
PDB ID:
8FZC
EMDB ID:
Title:
HIV-2 Gag Capsid from Immature Virus-like Particles
Biological Source:
PDB Version:
Deposition Date:
2023-01-28
Release Date:
2023-06-07
Method Details:
Experimental Method:
Resolution:
5.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Spacer peptide 2
Chain IDs:A, B, C
Chain Length:224
Number of Molecules:3
Biological Source:Human immunodeficiency virus type 2 (ISOLATE ROD)
Ligand Molecules
Primary Citation
HIV-2 Immature Particle Morphology Provides Insights into Gag Lattice Stability and Virus Maturation.
J.Mol.Biol. 435 168143 168143 (2023)
PMID: 37150290 DOI: 10.1016/j.jmb.2023.168143

Abstact

Retrovirus immature particle morphology consists of a membrane enclosed, pleomorphic, spherical and incomplete lattice of Gag hexamers. Previously, we demonstrated that human immunodeficiency virus type 2 (HIV-2) immature particles possess a distinct and extensive Gag lattice morphology. To better understand the nature of the continuously curved hexagonal Gag lattice, we have used the single particle cryo-electron microscopy method to determine the HIV-2 Gag lattice structure for immature virions. The reconstruction map at 5.5 Å resolution revealed a stable, wineglass-shaped Gag hexamer structure with structural features consistent with other lentiviral immature Gag lattice structures. Cryo-electron tomography provided evidence for nearly complete ordered Gag lattice structures in HIV-2 immature particles. We also solved a 1.98 Å resolution crystal structure of the carboxyl-terminal domain (CTD) of the HIV-2 capsid (CA) protein that identified a structured helix 12 supported via an interaction of helix 10 in the absence of the SP1 region of Gag. Residues at the helix 10-12 interface proved critical in maintaining HIV-2 particle release and infectivity. Taken together, our findings provide the first 3D organization of HIV-2 immature Gag lattice and important insights into both HIV Gag lattice stabilization and virus maturation.

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