8FVG image
Entry Detail
PDB ID:
8FVG
EMDB ID:
Keywords:
Title:
Pseudomonas phage E217 contracted sheath
Biological Source:
PDB Version:
Deposition Date:
2023-01-18
Release Date:
2023-07-26
Method Details:
Experimental Method:
Resolution:
3.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Sheath protein gp31
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M
Chain Length:504
Number of Molecules:13
Biological Source:Pseudomonas phage vB_PaeM_E217
Ligand Molecules
Primary Citation
High-resolution cryo-EM structure of the Pseudomonas bacteriophage E217.
Nat Commun 14 4052 4052 (2023)
PMID: 37422479 DOI: 10.1038/s41467-023-39756-z

Abstact

E217 is a Pseudomonas phage used in an experimental cocktail to eradicate cystic fibrosis-associated Pseudomonas aeruginosa. Here, we describe the structure of the whole E217 virion before and after DNA ejection at 3.1 Å and 4.5 Å resolution, respectively, determined using cryogenic electron microscopy (cryo-EM). We identify and build de novo structures for 19 unique E217 gene products, resolve the tail genome-ejection machine in both extended and contracted states, and decipher the complete architecture of the baseplate formed by 66 polypeptide chains. We also determine that E217 recognizes the host O-antigen as a receptor, and we resolve the N-terminal portion of the O-antigen-binding tail fiber. We propose that E217 design principles presented in this paper are conserved across PB1-like Myoviridae phages of the Pbunavirus genus that encode a ~1.4 MDa baseplate, dramatically smaller than the coliphage T4.

Legend

Protein

Chemical

Disease

Primary Citation of related structures