8FNF image
Entry Detail
PDB ID:
8FNF
EMDB ID:
Title:
Cryo-EM structure of RNase-untreated RESC-C in trypanosomal RNA editing
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2022-12-27
Release Date:
2023-07-19
Method Details:
Experimental Method:
Resolution:
3.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:RAP domain-containing protein
Chain IDs:G (auth: 10)
Chain Length:543
Number of Molecules:1
Biological Source:Trypanosoma brucei
Polymer Type:polypeptide(L)
Description:Phytanoyl-CoA dioxygenase family protein
Chain IDs:H (auth: 14)
Chain Length:366
Number of Molecules:1
Biological Source:Trypanosoma brucei
Polymer Type:polypeptide(L)
Description:Mitochondrial RNA binding protein
Chain IDs:C (auth: 5)
Chain Length:310
Number of Molecules:1
Biological Source:Trypanosoma brucei
Polymer Type:polypeptide(L)
Description:RAP domain-containing protein
Chain IDs:D (auth: 6)
Chain Length:516
Number of Molecules:1
Biological Source:Trypanosoma brucei
Polymer Type:polypeptide(L)
Description:RxLR effector protein
Chain IDs:E (auth: 7)
Chain Length:174
Number of Molecules:1
Biological Source:Trypanosoma brucei
Polymer Type:polypeptide(L)
Description:Mitochondrial RNA binding complex 1 subunit
Chain IDs:F (auth: 8)
Chain Length:545
Number of Molecules:1
Biological Source:Trypanosoma brucei
Polymer Type:polyribonucleotide
Description:gRNA
Chain IDs:B (auth: g)
Chain Length:16
Number of Molecules:1
Biological Source:Trypanosoma brucei
Polymer Type:polyribonucleotide
Description:mRNA
Chain IDs:A (auth: m)
Chain Length:20
Number of Molecules:1
Biological Source:Trypanosoma brucei
Ligand Molecules
Primary Citation
Structural basis of gRNA stabilization and mRNA recognition in trypanosomal RNA editing.
Science 381 eadg4725 eadg4725 (2023)
PMID: 37410820 DOI: 10.1126/science.adg4725

Abstact

In Trypanosoma brucei, the editosome, composed of RNA-editing substrate-binding complex (RESC) and RNA-editing catalytic complex (RECC), orchestrates guide RNA (gRNA)-programmed editing to recode cryptic mitochondrial transcripts into messenger RNAs (mRNAs). The mechanism of information transfer from gRNA to mRNA is unclear owing to a lack of high-resolution structures for these complexes. With cryo-electron microscopy and functional studies, we have captured gRNA-stabilizing RESC-A and gRNA-mRNA-binding RESC-B and RESC-C particles. RESC-A sequesters gRNA termini, thus promoting hairpin formation and blocking mRNA access. The conversion of RESC-A into RESC-B or -C unfolds gRNA and allows mRNA selection. The ensuing gRNA-mRNA duplex protrudes from RESC-B, likely exposing editing sites to RECC-catalyzed cleavage, uridine insertion or deletion, and ligation. Our work reveals a remodeling event facilitating gRNA-mRNA hybridization and assembly of a macromolecular substrate for the editosome's catalytic modality.

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Primary Citation of related structures