8FN6 image
Deposition Date 2022-12-27
Release Date 2023-07-19
Last Version Date 2024-06-19
Entry Detail
PDB ID:
8FN6
Title:
Cryo-EM structure of RNase-untreated RESC-A in trypanosomal RNA editing
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.70 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:RNA-editing substrate-binding complex protein 1 (RESC1)
Gene (Uniprot):Tb07.22O10.680
Chain IDs:B (auth: 1)
Chain Length:473
Number of Molecules:1
Biological Source:Trypanosoma brucei
Polymer Type:polypeptide(L)
Molecule:RNA-editing substrate-binding complex protein 2 (RESC2)
Gene (Uniprot):GRBC2
Chain IDs:C (auth: 2)
Chain Length:492
Number of Molecules:1
Biological Source:Trypanosoma brucei
Polymer Type:polypeptide(L)
Molecule:RNA-editing substrate-binding complex protein 3 (RESC3)
Gene (Uniprot):Tb11.01.8620
Chain IDs:D (auth: 3)
Chain Length:482
Number of Molecules:1
Biological Source:Trypanosoma brucei
Polymer Type:polypeptide(L)
Molecule:RNA-editing substrate-binding complex protein 4 (RESC4)
Gene (Uniprot):Tb11.02.5390
Chain IDs:E (auth: 4)
Chain Length:1087
Number of Molecules:1
Biological Source:Trypanosoma brucei
Polymer Type:polypeptide(L)
Molecule:RNA-editing substrate-binding complex protein 5 (RESC5)
Gene (Uniprot):Tb10.389.1910
Chain IDs:F (auth: 5)
Chain Length:402
Number of Molecules:1
Biological Source:Trypanosoma brucei
Polymer Type:polypeptide(L)
Molecule:RNA-editing substrate-binding complex protein 6 (RESC6)
Gene (Uniprot):Tb05.26K5.120
Chain IDs:G (auth: 6)
Chain Length:516
Number of Molecules:1
Biological Source:Trypanosoma brucei
Polymer Type:polyribonucleotide
Molecule:gRNA
Chain IDs:A (auth: g)
Chain Length:46
Number of Molecules:1
Biological Source:Trypanosoma brucei
Ligand Molecules
Primary Citation
Structural basis of gRNA stabilization and mRNA recognition in trypanosomal RNA editing.
Science 381 eadg4725 eadg4725 (2023)
PMID: 37410820 DOI: 10.1126/science.adg4725

Abstact

In Trypanosoma brucei, the editosome, composed of RNA-editing substrate-binding complex (RESC) and RNA-editing catalytic complex (RECC), orchestrates guide RNA (gRNA)-programmed editing to recode cryptic mitochondrial transcripts into messenger RNAs (mRNAs). The mechanism of information transfer from gRNA to mRNA is unclear owing to a lack of high-resolution structures for these complexes. With cryo-electron microscopy and functional studies, we have captured gRNA-stabilizing RESC-A and gRNA-mRNA-binding RESC-B and RESC-C particles. RESC-A sequesters gRNA termini, thus promoting hairpin formation and blocking mRNA access. The conversion of RESC-A into RESC-B or -C unfolds gRNA and allows mRNA selection. The ensuing gRNA-mRNA duplex protrudes from RESC-B, likely exposing editing sites to RECC-catalyzed cleavage, uridine insertion or deletion, and ligation. Our work reveals a remodeling event facilitating gRNA-mRNA hybridization and assembly of a macromolecular substrate for the editosome's catalytic modality.

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Primary Citation of related structures