8FHY image
Entry Detail
PDB ID:
8FHY
Title:
Crystal structure of the SARS-CoV-2 receptor binding domain in complex with neutralizing antibody WRAIR-5021
Biological Source:
PDB Version:
Deposition Date:
2022-12-15
Release Date:
2024-01-17
Method Details:
Experimental Method:
Resolution:
2.53 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:WRAIR-5021 Fab Heavy chain
Chain IDs:C (auth: H), F (auth: C), I (auth: F)
Chain Length:220
Number of Molecules:3
Biological Source:Macaca mulatta
Polymer Type:polypeptide(L)
Description:Spike protein S1
Chain IDs:A (auth: I), D (auth: A), G (auth: D)
Chain Length:205
Number of Molecules:3
Biological Source:Severe acute respiratory syndrome coronavirus 2
Polymer Type:polypeptide(L)
Description:WRAIR-5021 Fab Light chain
Chain IDs:B (auth: L), E (auth: B), H (auth: E)
Chain Length:214
Number of Molecules:3
Biological Source:Macaca mulatta
Primary Citation

Abstact

The repeat emergence of SARS-CoV-2 variants of concern (VoC) with decreased susceptibility to vaccine-elicited antibodies highlights the need to develop next-generation vaccine candidates that confer broad protection. Here we describe the antibody response induced by the SARS-CoV-2 Spike Ferritin Nanoparticle (SpFN) vaccine candidate adjuvanted with the Army Liposomal Formulation including QS21 (ALFQ) in non-human primates. By isolating and characterizing several monoclonal antibodies directed against the Spike Receptor Binding Domain (RBD), N-Terminal Domain (NTD), or the S2 Domain, we define the molecular recognition of vaccine-elicited cross-reactive monoclonal antibodies (mAbs) elicited by SpFN. We identify six neutralizing antibodies with broad sarbecovirus cross-reactivity that recapitulate serum polyclonal antibody responses. In particular, RBD mAb WRAIR-5001 binds to the conserved cryptic region with high affinity to sarbecovirus clades 1 and 2, including Omicron variants, while mAb WRAIR-5021 offers complete protection from B.1.617.2 (Delta) in a murine challenge study. Our data further highlight the ability of SpFN vaccination to stimulate cross-reactive B cells targeting conserved regions of the Spike with activity against SARS CoV-1 and SARS-CoV-2 variants.

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