8FDA image
Deposition Date 2022-12-02
Release Date 2023-08-23
Last Version Date 2023-09-13
Entry Detail
PDB ID:
8FDA
Keywords:
Title:
Human Cytochrome P450 17A1 in complex with steroidal isonitrile inhibitor
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Steroid 17-alpha-hydroxylase/17,20 lyase
Gene (Uniprot):CYP17A1
Chain IDs:A, B, C, D
Chain Length:494
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
Selective steroidogenic cytochrome P450 haem iron ligation by steroid-derived isonitriles.
Commun Chem 6 183 183 (2023)
PMID: 37660137 DOI: 10.1038/s42004-023-00994-3

Abstact

Alkyl isonitriles, R-NC, have previously been shown to ligate the heme (haem) iron of cytochromes P450 in both accessible oxidation states (ferrous, Fe2+, and ferric, Fe3+). Herein, the preparation of four steroid-derived isonitriles and their interactions with several P450s, including the steroidogenic CYP17A1 and CYP106A2, as well as the more promiscuous drug metabolizers CYP3A4 and CYP2D6, is described. It was found that successful ligation of the heme iron by the isonitrile functionality for a given P450 depends on both the position and stereochemistry of the isonitrile on the steroid skeleton. Spectral studies indicate that isonitrile ligation of the ferric heme is stable upon reduction to the ferrous form, with reoxidation resulting in the original complex. A crystallographic structure of CYP17A1 with an isonitrile derived from pregnanalone further confirmed the interaction and identified the absolute stereochemistry of the bound species.

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